Table of Contents

In order to make sure we're all on the same page, here are a few conventions to follow.

Layer name

TLDR:

mcmaster:

Conventions:

Image

High resolution images should be named like: <vendor>_<id>_<layer>_<image type>.jpg

Required fields: vendor, id. Add the others if you have them

Spaces are not allowed. Fields should not have _'s. Translate these to -'s if needed

Some sample image names:

Technique

Abbreviated names for different microscope configurations

Applies Abbreviation Name Notes
OM bf Brightfield Usually omitted / implied default
EM bs Backscatter
OM df Darkfield
OM dic Differential interference contrast
EM se Secondary electron
OM xpol Crossed polarizers

Where:

Optical

If you've calibrated your microscope against a standard of some sort, please add an overlay with the objective name and a scale bar to your images. (Contact azonenberg if you'd like the GIMP files for our standard overlay, which you can modify for your setup.)

Objective

Please add new objectives to this list as necessary.

NOTE: Imaging typically involves a 10x relay lens to make actual magnification times 10. For example, a Mit20x objective is used with a 10x relay lens to make the final image at 200x magnification on the CCD. However, chip pages should include scale bars whenever possible as sensor size has no relation to pixel size, especially in stitched or downsampled images.

See also

SEM

azonenberg's new standard is: foo_01_type_20kV_10kx_9mm.jpg

“type” may be “se” for secondary electron or “bse” for backscatter.

Magnification should be abbreviated if a multiple of 1000, otherwise written out in full (ex: 3900x, 4kx).

Working distance and accelerating voltage should also be specified to aid in interpretation of the image. Typically for high-resolution images one will use the lowest probe current and smallest aperture that give a good signal-to-noise ratio, so this information is often omitted from the filename.